bioinformatics

ImRex - CNN

Convolutional neural network for TCR-epitope recognition prediction using a combined sequence input represention.

MILES Subgraph Miner

A `Java` tool for mining subgraphs that are associated with a specific set of nodes in a network.

Computational skills primer

An overview of computational skills and tools required for suriving a PhD in bioinformatics.

Biomolecular id remapper

A `Python` script for remapping biomolecular identifiers via the UniProt API.

TCRex (server back end)

A web tool for the prediction of TCR–epitope recognition.

Gene Ontology scripts

A `Python` package and script for handling Gene Ontology data and performing enrichment tests.